The trick is to make things super easy to get out, and super easy to put away. I can't believe how much better my life has got since I stuck a proper many drawered tool-chest in the box room.
I have a plan to make a few work surfaces that are a bit like giant draws that I can fold a lid over and put work-in-progress away quickly and tidily and also get it out again with minimal fuss. Of course first I have to find a way to clear enough free shelf space in the box room of doom so that I can have perhaps three of them stored on one shelf.
In the garage, I have a 63" tool box and a military 4 drawer legal sized filing cabinet painted to match that holds corded power tools. On top of that, I built cordless drill/driver storage that also holds my drill and bit cases. In the office, I have a 26" tool chest for the precision hand tools, company stuff, hand held TE and probes.
All the kill/maim tools( drill press, table saw, band saw, jointer/planer) have casters on them, either when I got them or I added them. I built 2, 2' by 4' rolling workbenches that have both miter saws, belt sander, bench grinder and mini black and decker work mate. Mrs GreyWoolfe helped purge all the stuff there for ever that never got used and reorganized placement of the tool box and storage shelves that the cleanup went so well, I was able to eliminate 1 shelving unit that is now being used elsewhere. My work table breaks down for easy storage, again a 2' by 4' piece of 3/4" plywood with 2X2 runners that fit into my saw horses. All the rolling stock is lined up against 1 wall with various things hanging above them and gets returned after being used. The most important thing she did was help provide much better placement and workflow. I actually want to go out there and do things instead of being forced to go.
Next is going to Harbor Freight tonight to get a floor standing parts bin organizer for all the nuts, bolts, washers, screws, nails and similar that will get all of that in one place. After all, need room for the thickness planer I just ordered. When that gets delivered to Home Depot, I will be buying some 2X4s and casters to build a stand as I refuse to pay $170 for the associated stand.