The attenutator networks are socketed right? In individual x10, x2, x5 modules, the sockets may have excess oxides on them, and you'll need to clean them.
If that doesn't solve the issue, swap out all the attenuator units, x100, x10, x5, x2 with the ones in channel 2. I assume channel 2 has no issues.
If the issue persists, probe cathode of CR104. Observe the waveform while you input a square wave into channel one. See if both observed waveforms match with the test scope and scope under test.
If it doesn't, the issue is not in the attenuator portion but rather the amplifier portion.