Looks good, but I'd worry about "hook" (slight rise/droop at time constants other than the dominant compensation TC). Curious how good the CMRR will be at higher frequencies.
I made a 1000:1 sensor with this sort of design; I used 4.7pF capacitors in the divider chain (I think with the same number of resistors, too), which of course would require a whopping 1nF to compensate, so I didn't compensate it by variable capacitance, I did it by variable resistance. This varies DC instead of AC gain, allowing compensation; a second trimmer sets DC+AC total gain, allowing calibration as well.
When you do the layout, mind to keep copper (including ground plane) well away from the dividers! This also serves as isolation/creepage/clearance (since 100x at this voltage range is going to be, what, CAT II range I suppose?). The rest of the circuit should have ground plane, stitched top and bottom if it's two layer.
Tim