In the interests of preserving low frequency fidelity, I would be inclined to retain any existing DC coupling, and keep the bipolar power supplies.
However, I'm not familiar with geophones nor the typical data it generates, so I'm making some assumptions about your frequencies of interest.
If you do decide to go with Vref/2, it is important that the input AC coupling capacitor has enough low frequency response, otherwise your data may be distorted.