Using a logic probe is kind of a habit. It can be replaced with other things.
It is kind of the digital version of the continuity mode the multimeter. Like you don't do everything measure with the continuity probe you don't do that with a logic probe. But they are good for quickly checking if there is a signal or not, instead of having to dig out the oscilloscope probes under a mess of wire, adjust the oscilloscope (trigger, horizontal, vertical), or, the non sportsmanship version, press the auto set button (and then spend the next minutes to undo the settings auto set did ...).
While someone still fiddles with the oscilloscope I already know there is a kind of clock signal on the SPI SCK line, there is some PWM output on another pin, the UART is receiving someting, and when the button is pressed, there is indeed a low (yes, I prefer active-low buttons) on my MCU input pin.